STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFO_1438Conserved hypothetical protein, membrane. (240 aa)    
Predicted Functional Partners:
GFO_1437
FixH-like protein.
 
     0.956
ccoP
Cbb3-type cytochrome c oxidase subunit III.
 
     0.899
GFO_1436
FixG-like iron-sulfur-cluster-binding protein.
 
     0.899
ccoN/ccoO
Cbb3-type cytochrome c oxidase subunit I and II fusion protein; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.898
GFO_1431
Heavy metal-transporting P-type ATPase-most likely copper-transporting.
 
   
 0.861
ccoS
Cbb3-type cytochrome oxidase maturation protein.
 
     0.835
GFO_1398
Cbb3-type cytochrome c oxidase subunit I.
 
   
 0.752
GFO_1434
Hypothetical protein.
 
     0.700
hemN-2
Oxygen-independent coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
   
 0.696
GFO_1397
Cbb3-type cytochrome c oxidase subunit II.
 
     0.636
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.