STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolDLipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (219 aa)    
Predicted Functional Partners:
GFO_0197
FtsX family membrane protein (predicted permease).
 
 0.960
GFO_1112
FtsX family membrane protein (predicted permease).
 
 0.957
GFO_2956
FtsX family membrane protein (predicted permease).
 
 0.957
GFO_0198
FtsX family membrane protein (predicted permease).
 
 0.955
GFO_0713
FtsX family membrane protein (predicted permease).
  
 
 0.948
GFO_0714
FtsX family membrane protein (predicted permease).
  
 
 0.948
GFO_0715
FtsX family membrane protein (predicted permease).
  
 
 0.948
lolE
Lipoprotein releasing system transmembrane protein.
 
 0.923
GFO_3333
LolC-like FtsX family membrane protein (predicted permease).
 
 0.923
GFO_1458
Conserved hypothetical protein.
       0.780
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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