STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFO_1483Secreted protein. (125 aa)    
Predicted Functional Partners:
GFO_1484
HTH_3 family transcriptional regulator protein.
 
     0.754
GFO_1067
Hypothetical protein.
  
     0.749
GFO_1111
Conserved hypothetical protein.
  
     0.747
GFO_1792
Hypothetical protein.
  
     0.735
GFO_0613
Membrane protein.
 
     0.734
GFO_1512
Hypothetical protein.
  
     0.729
GFO_3280
Membrane protein.
  
     0.709
GFO_3281
Hypothetical protein.
  
     0.707
GFO_0192
Membrane or secreted protein.
  
     0.697
GFO_1888
Hypothetical protein.
  
     0.697
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.