STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFO_1619Hypothetical protein. (309 aa)    
Predicted Functional Partners:
GFO_1620
Phosphorylase family protein.
  
    0.824
GFO_1618
SUI1 family translation initiation factor.
       0.722
GFO_1617
Iron/ascorbate-dependent oxidoreductase family protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
       0.719
GFO_3276
Conserved hypothetical protein, membrane.
  
     0.708
GFO_1549
Hypothetical protein.
  
 
   0.683
GFO_2663
Secreted protein.
  
     0.641
GFO_3471
Conserved hypothetical protein, secreted.
  
     0.624
GFO_1622
Periplasmic substrate-binding protein.
       0.615
GFO_1780
Membrane protein.
  
     0.595
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
       0.565
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.