STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFO_1939Conserved hypothetical protein. (206 aa)    
Predicted Functional Partners:
GFO_1935
Conserved hypothetical protein, membrane.
 
     0.948
GFO_1934
Conserved hypothetical protein, membrane.
 
     0.947
GFO_1936
Membrane protein containing DUF1550.
 
     0.947
GFO_1937
Conserved hypothetical protein.
 
    0.946
GFO_1940
DNA gyrase modulator family protein.
 
     0.884
GFO_1941
DNA gyrase modulator family protein.
 
     0.871
GFO_1938
MoxR-like AAA family ATPase.
 
     0.828
GFO_3632
Diphosphomevalonate decarboxylase.
   
 
 0.621
GFO_0302
Fatty acid hydroxylase.
   
 
 0.474
GFO_0971
Sterol desaturase family protein.
   
 
 0.474
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.