Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GFO_1971 | thrA | GFO_1971 | GFO_1970 | Hypothetical protein. | Bifunctional aspartokinase/homoserine dehydrogenase. | 0.603 |
GFO_1971 | thrB | GFO_1971 | GFO_1969 | Hypothetical protein. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.603 |
GFO_1971 | thrC | GFO_1971 | GFO_1968 | Hypothetical protein. | Threonine synthase. | 0.603 |
thrA | GFO_1971 | GFO_1970 | GFO_1971 | Bifunctional aspartokinase/homoserine dehydrogenase. | Hypothetical protein. | 0.603 |
thrA | thrB | GFO_1970 | GFO_1969 | Bifunctional aspartokinase/homoserine dehydrogenase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.999 |
thrA | thrC | GFO_1970 | GFO_1968 | Bifunctional aspartokinase/homoserine dehydrogenase. | Threonine synthase. | 0.998 |
thrB | GFO_1971 | GFO_1969 | GFO_1971 | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | Hypothetical protein. | 0.603 |
thrB | thrA | GFO_1969 | GFO_1970 | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | Bifunctional aspartokinase/homoserine dehydrogenase. | 0.999 |
thrB | thrC | GFO_1969 | GFO_1968 | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | Threonine synthase. | 0.999 |
thrC | GFO_1971 | GFO_1968 | GFO_1971 | Threonine synthase. | Hypothetical protein. | 0.603 |
thrC | thrA | GFO_1968 | GFO_1970 | Threonine synthase. | Bifunctional aspartokinase/homoserine dehydrogenase. | 0.998 |
thrC | thrB | GFO_1968 | GFO_1969 | Threonine synthase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.999 |