STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFO_1975Magnesium chelatase subunit Chll. (487 aa)    
Predicted Functional Partners:
GFO_1976
Conserved hypothetical protein.
    0.971
hemH
Ferrochelatase (protoheme ferro-lyase); Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
 
 0.918
GFO_3217
Membrane protein, UPF0093.
     
 0.905
GFO_1455
Membrane protein containing DUF1550.
  
 
 0.732
GFO_1981
Conserved hypothetical protein, secreted.
  
 
 0.732
batA
Membrane protein containing von Willebrand factor(vWA) type A domain.
  
 
 0.732
batB
Membrane protein containing von Willebrand factor (vWA) type A domain.
  
 
 0.732
GFO_1936
Membrane protein containing DUF1550.
  
 
 0.698
GFO_1977
PA-phosphatase related phosphoesterase.
       0.509
GFO_1974
Secreted flavin-containing amine oxidoreductase.
     
 0.491
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.