Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GFO_2020MaoC-like domain protein. (135 aa)    
Predicted Functional Partners:
GFO_2024
Short-chain dehydrogenase/reductase family protein.
  
 0.813
GFO_1047
3-hydroxyacyl-CoA dehydrogenase.
  
 0.780
kat
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.768
GFO_2017
Conserved hypothetical protein.
  
    0.743
GFO_2019
GNAT family acetyltransferase.
     
 0.741
fmt-2
methionyl-tRNA formyltransferase.
       0.737
GFO_2022
Conserved hypothetical protein.
       0.732
GFO_2027
SpsC-like DegT/DnrJ/EryC1/StrS family aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
       0.723
GFO_1889
Conserved hypothetical protein, secreted.
  
 
 0.722
GFO_2021
GNAT family acetyltransferase-possibly polyamine acetyltransferase.
     
 0.722
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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