STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFO_2060Conserved hypothetical protein, secreted. (649 aa)    
Predicted Functional Partners:
GFO_2059
Peptidase, family M12A.
  
     0.755
GFO_2058
Peptidase, family M12A.
  
     0.747
GFO_0394
Protein containing immunoglobulin-like domain.
  
     0.728
GFO_0393
Secreted hyalin domain protein-likely involved in carbohydrate binding or cell-adhesion.
  
     0.599
GFO_0544
Conserved hypothetical protein-possibly a methyltransferase.
  
     0.581
GFO_0659
Secreted protein containing hyalin domains.
  
     0.558
GFO_2061
Membrane or secreted protein.
      
0.538
GFO_0488
Secreted protein.
  
     0.485
GFO_2625
Two-component system sensor histidine kinase.
 
     0.474
GFO_2062
Membrane or secreted protein.
 
    
0.444
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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