STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFO_2086Zinc-type alcohol dehydrogenase. (334 aa)    
Predicted Functional Partners:
GFO_1717
Zinc-type alcohol dehydrogenase.
  
 
0.957
GFO_1874
Aldo/keto reductase family protein.
  
 
 0.918
GFO_0760
Zinc-type alcohol dehydrogenase.
  
  
 
0.917
GFO_1974
Secreted flavin-containing amine oxidoreductase.
 
  
  0.912
GFO_3401
Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
 
 
 0.912
ccoN/ccoO
Cbb3-type cytochrome c oxidase subunit I and II fusion protein; Belongs to the heme-copper respiratory oxidase family.
  
    0.563
GFO_2087
Protein containing DUF323.
       0.539
maeB
NADP-dependent malic enzyme.
  
  
 0.533
GFO_2084
L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.502
GFO_2085
Membrane protein.
       0.486
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.