STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cinACinA-like competence-damaged protein; Belongs to the CinA family. (419 aa)    
Predicted Functional Partners:
GFO_3189
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
  
 
 0.951
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
  
 
 0.951
nadC
Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family.
 
  
 0.946
surE
5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
 
  
  0.920
GFO_0643
Secreted or periplasmic 5'-nucleotidase; Belongs to the 5'-nucleotidase family.
   
 
  0.913
ushA-2
Periplasmic 5'-nucleotidase; Belongs to the 5'-nucleotidase family.
   
 
  0.913
GFO_2247
Fumarylacetoacetate hydrolase domain-containing protein.
       0.822
dnaQ
DNA polymerase III subunit epsilon.
       0.818
GFO_2246
Hypothetical protein.
  
    0.802
GFO_0977
D-isomer specific 2-hydroxyacid dehydrogenase.
  
    0.703
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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