STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFO_2350Conserved hypothetical protein, membrane. (158 aa)    
Predicted Functional Partners:
GFO_2349
Band 7 family protein.
       0.785
GFO_2352
Conserved hypothetical protein.
       0.785
GFO_2351
Conserved hypothetical protein, secreted.
       0.782
GFO_2353
Haloacid dehalogenase-like hydrolase.
       0.773
GFO_2354
Membrane protein containing DUF819.
       0.658
GFO_2348
S1/P1 endonuclease family protein.
       0.537
GFO_2355
Conserved hypothetical protein.
       0.518
GFO_3606
Sodium:solute symporter family protein.
  
     0.511
GFO_3605
Conserved hypothetical protein, membrane or secreted.
  
     0.455
GFO_2845
SusD/RagB family protein.
  
     0.411
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.