Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GFO_2385 | rpsU | GFO_2385 | GFO_2387 | Sigma-54 modulation protein-like ribosome-associated protein. | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.917 |
| GFO_2385 | xerC | GFO_2385 | GFO_2386 | Sigma-54 modulation protein-like ribosome-associated protein. | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.774 |
| GFO_2388 | rpsU | GFO_2388 | GFO_2387 | Secreted metallo-beta-lactamase domain protein. | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.563 |
| GFO_2388 | xerC | GFO_2388 | GFO_2386 | Secreted metallo-beta-lactamase domain protein. | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.414 |
| ftsK | parB | GFO_2183 | GFO_0805 | DNA translocase. | ParB-like chromosome partition protein; Belongs to the ParB family. | 0.798 |
| ftsK | xerC | GFO_2183 | GFO_2386 | DNA translocase. | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.620 |
| parB | ftsK | GFO_0805 | GFO_2183 | ParB-like chromosome partition protein; Belongs to the ParB family. | DNA translocase. | 0.798 |
| parB | xerC | GFO_0805 | GFO_2386 | ParB-like chromosome partition protein; Belongs to the ParB family. | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.429 |
| rpsU | GFO_2385 | GFO_2387 | GFO_2385 | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | Sigma-54 modulation protein-like ribosome-associated protein. | 0.917 |
| rpsU | GFO_2388 | GFO_2387 | GFO_2388 | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | Secreted metallo-beta-lactamase domain protein. | 0.563 |
| rpsU | xerC | GFO_2387 | GFO_2386 | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.645 |
| xerC | GFO_2385 | GFO_2386 | GFO_2385 | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | Sigma-54 modulation protein-like ribosome-associated protein. | 0.774 |
| xerC | GFO_2388 | GFO_2386 | GFO_2388 | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | Secreted metallo-beta-lactamase domain protein. | 0.414 |
| xerC | ftsK | GFO_2386 | GFO_2183 | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | DNA translocase. | 0.620 |
| xerC | parB | GFO_2386 | GFO_0805 | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | ParB-like chromosome partition protein; Belongs to the ParB family. | 0.429 |
| xerC | rpsU | GFO_2386 | GFO_2387 | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.645 |