STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GFO_2467Hypothetical protein. (93 aa)    
Predicted Functional Partners:
GFO_2466
Hypothetical protein.
       0.773
GFO_2465
Membrane protein.
       0.727
GFO_2468
Conserved hypothetical protein.
       0.671
GFO_2469
Phage DNA modification methylase.
       0.671
GFO_2470
Conserved hypothetical protein-possibly DNA-methyltransferase.
       0.671
GFO_2463
Hypothetical protein.
       0.642
GFO_2464
Hypothetical protein.
       0.642
GFO_2462
Hypothetical protein.
       0.576
GFO_2472
Hypothetical protein.
       0.439
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.