STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFO_2587Type I restriction-modification system restriction subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification. (1064 aa)    
Predicted Functional Partners:
GFO_2592
Type I restriction-modification system methyltransferase subunit.
 
 
 0.986
GFO_2591
Type I restriction-modification system DNA specificity subunit.
 
  
 0.979
GFO_0677
Type I restriction-modification system methyltransferase subunit.
 
 
 0.947
GFO_0679
Type I restriction-modification system DNA specificity subunit.
 
  
 0.897
GFO_2589
Conserved hypothetical protein.
 
   0.849
GFO_2588
Protein containing DUF262 and DUF1524.
 
   0.846
GFO_1196
Membrane protein containing divergent AAA domain.
 
    0.818
GFO_1371
Type I restriction-modification system methyltransferase subunit.
 
 
 0.804
GFO_2590
Hypothetical protein.
       0.752
GFO_2586
Hypothetical protein.
       0.651
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.