Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GFO_2296 | rlmF | GFO_2296 | GFO_2659 | Protein containing DUF1456. | Protein containing DUF890; Specifically methylates the adenine in position 1618 of 23S rRNA. | 0.468 |
GFO_2657 | dbpA | GFO_2657 | GFO_2658 | Hypothetical protein. | ATP-independent RNA helicase DbpA. | 0.596 |
GFO_2657 | rlmF | GFO_2657 | GFO_2659 | Hypothetical protein. | Protein containing DUF890; Specifically methylates the adenine in position 1618 of 23S rRNA. | 0.440 |
GFO_2660 | agcS | GFO_2660 | GFO_2661 | Conserved hypothetical protein, membrane. | Sodium:alanine symporter family protein. | 0.551 |
GFO_2660 | dbpA | GFO_2660 | GFO_2658 | Conserved hypothetical protein, membrane. | ATP-independent RNA helicase DbpA. | 0.428 |
GFO_2660 | rlmF | GFO_2660 | GFO_2659 | Conserved hypothetical protein, membrane. | Protein containing DUF890; Specifically methylates the adenine in position 1618 of 23S rRNA. | 0.578 |
agcS | GFO_2660 | GFO_2661 | GFO_2660 | Sodium:alanine symporter family protein. | Conserved hypothetical protein, membrane. | 0.551 |
agcS | rlmF | GFO_2661 | GFO_2659 | Sodium:alanine symporter family protein. | Protein containing DUF890; Specifically methylates the adenine in position 1618 of 23S rRNA. | 0.423 |
dbpA | GFO_2657 | GFO_2658 | GFO_2657 | ATP-independent RNA helicase DbpA. | Hypothetical protein. | 0.596 |
dbpA | GFO_2660 | GFO_2658 | GFO_2660 | ATP-independent RNA helicase DbpA. | Conserved hypothetical protein, membrane. | 0.428 |
dbpA | rlmF | GFO_2658 | GFO_2659 | ATP-independent RNA helicase DbpA. | Protein containing DUF890; Specifically methylates the adenine in position 1618 of 23S rRNA. | 0.664 |
rlmF | GFO_2296 | GFO_2659 | GFO_2296 | Protein containing DUF890; Specifically methylates the adenine in position 1618 of 23S rRNA. | Protein containing DUF1456. | 0.468 |
rlmF | GFO_2657 | GFO_2659 | GFO_2657 | Protein containing DUF890; Specifically methylates the adenine in position 1618 of 23S rRNA. | Hypothetical protein. | 0.440 |
rlmF | GFO_2660 | GFO_2659 | GFO_2660 | Protein containing DUF890; Specifically methylates the adenine in position 1618 of 23S rRNA. | Conserved hypothetical protein, membrane. | 0.578 |
rlmF | agcS | GFO_2659 | GFO_2661 | Protein containing DUF890; Specifically methylates the adenine in position 1618 of 23S rRNA. | Sodium:alanine symporter family protein. | 0.423 |
rlmF | dbpA | GFO_2659 | GFO_2658 | Protein containing DUF890; Specifically methylates the adenine in position 1618 of 23S rRNA. | ATP-independent RNA helicase DbpA. | 0.664 |