STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltDGlutamate synthase (NADPH) small subunit. (486 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase (NADPH) large subunit.
 0.999
GFO_1248
Ferredoxin-dependent glutamate synthase family protein; Belongs to the glutamate synthase family.
 
 0.991
GFO_2326
Conserved hypothetical protein, membrane; Belongs to the glutamate synthase family.
 
 0.991
gdhA
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.939
gdhA-2
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.939
GFO_3277
PaaE-like NADH oxidoreductase-possibly involved in phenylacetic acid degradation.
   
 0.919
GFO_3530
Carbon-nitrogen hydrolase.
  
 0.917
glnA
Glutamine synthetase.
    
 0.915
purF
Amidophosphoribosyltransferase.
  
 
 0.915
carB
Carbamoyl-phosphate synthase large subunit.
  
 
 0.914
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.