STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFO_3065Protein belonging to PcrB family; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). (238 aa)    
Predicted Functional Partners:
GFO_1812
UbiA family prenyltransferase.
 
   
 0.810
GFO_3066
Conserved hypothetical protein; Belongs to the P-Pant transferase superfamily.
       0.799
GFO_0187
Conserved hypothetical protein.
  
     0.766
GFO_0073
Transmembrane family-2 glycosyl transferase-possibly involved in biofilm formation.
  
     0.756
GFO_0537
Conserved hypothetical protein-possibly a methyltransferase.
  
    0.750
GFO_2701
Transmembrane family-2 glycosyl transferase.
  
     0.749
GFO_3187
Secreted protein.
  
     0.705
GFO_1883
Conserved hypothetical protein, secreted.
  
     0.659
GFO_3628
Prenyltransferase family protein.
 
   
 0.657
GFO_0582
Conserved hypothetical protein, membrane.
  
     0.641
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.