STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFO_3419Sulfate transporter family protein. (525 aa)    
Predicted Functional Partners:
GFO_3420
Carbonic anhydrase.
  
 0.982
GFO_1788
Secreted protein.
    
   0.660
GFO_3418
Hypothetical protein.
       0.499
GFO_0370
Secreted lipase/esterase.
  
 
 
 0.459
mrpA
Na(+)/H(+) antiporter subunit A.
  
  
 0.438
GFO_1606
Acyl-carrier protein.
    
   0.432
GFO_1661
Acyl-carrier protein.
    
   0.432
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
   0.432
GFO_1280
Conserved hypothetical protein, membrane or secreted.
 
     0.400
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.