Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GFO_1055 | GFO_3567 | GFO_1055 | GFO_3567 | Hypothetical protein. | Conserved hypothetical protein. | 0.415 |
GFO_1055 | GFO_3568 | GFO_1055 | GFO_3568 | Hypothetical protein. | Conserved hypothetical protein. | 0.409 |
GFO_1788 | GFO_2695 | GFO_1788 | GFO_2695 | Secreted protein. | Conserved hypothetical protein. | 0.513 |
GFO_1788 | GFO_3567 | GFO_1788 | GFO_3567 | Secreted protein. | Conserved hypothetical protein. | 0.441 |
GFO_1788 | GFO_3568 | GFO_1788 | GFO_3568 | Secreted protein. | Conserved hypothetical protein. | 0.541 |
GFO_2286 | GFO_2695 | GFO_2286 | GFO_2695 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.742 |
GFO_2286 | GFO_3567 | GFO_2286 | GFO_3567 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.407 |
GFO_2286 | GFO_3568 | GFO_2286 | GFO_3568 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.424 |
GFO_2695 | GFO_1788 | GFO_2695 | GFO_1788 | Conserved hypothetical protein. | Secreted protein. | 0.513 |
GFO_2695 | GFO_2286 | GFO_2695 | GFO_2286 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.742 |
GFO_2695 | GFO_3567 | GFO_2695 | GFO_3567 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.526 |
GFO_2695 | GFO_3568 | GFO_2695 | GFO_3568 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.560 |
GFO_3564 | GFO_3565 | GFO_3564 | GFO_3565 | Conserved hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.596 |
GFO_3564 | GFO_3567 | GFO_3564 | GFO_3567 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.409 |
GFO_3564 | GFO_3568 | GFO_3564 | GFO_3568 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.409 |
GFO_3564 | bioA | GFO_3564 | GFO_3563 | Conserved hypothetical protein. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.578 |
GFO_3564 | bioB | GFO_3564 | GFO_3566 | Conserved hypothetical protein. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.432 |
GFO_3565 | GFO_3564 | GFO_3565 | GFO_3564 | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Conserved hypothetical protein. | 0.596 |
GFO_3565 | GFO_3567 | GFO_3565 | GFO_3567 | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Conserved hypothetical protein. | 0.518 |
GFO_3565 | GFO_3568 | GFO_3565 | GFO_3568 | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Conserved hypothetical protein. | 0.518 |
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