STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0ZRB5_SOLTURWD domain-containing protein. (248 aa)    
Predicted Functional Partners:
M0ZR67_SOLTU
OBG-type G domain-containing protein.
   
 
 0.940
M1AU16_SOLTU
OBG-type G domain-containing protein.
   
 
 0.940
M1DRE9_SOLTU
Protein kinase domain-containing protein.
    
   0.845
M1CP73_SOLTU
Uncharacterized protein.
   
 
 0.741
M1BBZ2_SOLTU
UPF0029 domain-containing protein.
    
 
 0.553
M1AWJ1_SOLTU
Uncharacterized protein.
   
  
 0.548
M1A4B8_SOLTU
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
   
  
 0.547
M0ZVU9_SOLTU
NUC153 domain-containing protein.
   
   0.527
M1CIX7_SOLTU
DUF2052 domain-containing protein.
      
 0.471
M1DC00_SOLTU
Uncharacterized protein.
   
    0.471
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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