STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0ZS27_SOLTUTubulin_C domain-containing protein. (141 aa)    
Predicted Functional Partners:
M0ZS26_SOLTU
Tubulin domain-containing protein.
 
     0.882
M1A2D6_SOLTU
AA_TRNA_LIGASE_II domain-containing protein.
   
  
 0.862
GATB
Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
  
  
 0.846
M0ZJD1_SOLTU
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
  
 0.812
M1A486_SOLTU
Uncharacterized protein.
  
 
 0.801
M1AD75_SOLTU
Uncharacterized protein.
  
 
 0.801
M1C8L5_SOLTU
Uncharacterized protein.
  
 
 0.801
M1D0Y8_SOLTU
Uncharacterized protein.
  
 
 0.801
M1C2I7_SOLTU
Uncharacterized protein.
   
  
 0.742
M1CDL5_SOLTU
Uncharacterized protein.
   
  
 0.742
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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