STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0ZSR7_SOLTUU1-type domain-containing protein. (202 aa)    
Predicted Functional Partners:
M1BK86_SOLTU
Uncharacterized protein.
   
 0.987
M0ZSK5_SOLTU
MFAP1 domain-containing protein.
   
 0.981
M1CAV6_SOLTU
PRP38_assoc domain-containing protein.
   
 0.973
M0ZS84_SOLTU
Sm domain-containing protein.
   
 0.966
M0ZXM4_SOLTU
U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.964
M1A8S1_SOLTU
Uncharacterized protein.
    
 0.959
M1ABR1_SOLTU
Uncharacterized protein.
    
 0.959
M1BSH6_SOLTU
Uncharacterized protein.
    
 0.959
M1CB01_SOLTU
Uncharacterized protein.
    
 0.959
M1CWH0_SOLTU
U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.
    
 0.959
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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