M0ZU81_SOLTU protein (Solanum tuberosum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M0ZU81_SOLTU

Uncharacterized protein; Belongs to the glycosyltransferase 2 family. (1139 aa)

Predicted Functional Partners:

M1C798_SOLTU

0.509

M0ZV36_SOLTU

0.476

M1C369_SOLTU

0.469

M1BRQ6_SOLTU

0.451

M1D1Q8_SOLTU

0.448

M1BYW7_SOLTU

0.444

M0ZN25_SOLTU

0.441

M1A1Z1_SOLTU

0.441

M1A3F7_SOLTU

0.441

M1C799_SOLTU

0.441

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M0ZN25_SOLTU	M0ZU81_SOLTU	M0ZN25	M0ZU81	Uncharacterized protein; Belongs to the sterol desaturase family.	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	0.441
M0ZU81_SOLTU	M0ZN25_SOLTU	M0ZU81	M0ZN25	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	Uncharacterized protein; Belongs to the sterol desaturase family.	0.441
M0ZU81_SOLTU	M0ZV36_SOLTU	M0ZU81	M0ZV36	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	Uncharacterized protein.	0.476
M0ZU81_SOLTU	M1A1Z1_SOLTU	M0ZU81	M1A1Z1	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	LRAT domain-containing protein.	0.441
M0ZU81_SOLTU	M1A3F7_SOLTU	M0ZU81	M1A3F7	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	Uncharacterized protein; Belongs to the sterol desaturase family.	0.441
M0ZU81_SOLTU	M1BRQ6_SOLTU	M0ZU81	M1BRQ6	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	Uncharacterized protein.	0.451
M0ZU81_SOLTU	M1BYW7_SOLTU	M0ZU81	M1BYW7	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	Uncharacterized protein.	0.444
M0ZU81_SOLTU	M1C369_SOLTU	M0ZU81	M1C369	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	Uncharacterized protein.	0.469
M0ZU81_SOLTU	M1C798_SOLTU	M0ZU81	M1C798	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	Wax2_C domain-containing protein.	0.509
M0ZU81_SOLTU	M1C799_SOLTU	M0ZU81	M1C799	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	Uncharacterized protein; Belongs to the sterol desaturase family.	0.441
M0ZU81_SOLTU	M1D1Q8_SOLTU	M0ZU81	M1D1Q8	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	Uncharacterized protein.	0.448
M0ZV36_SOLTU	M0ZU81_SOLTU	M0ZV36	M0ZU81	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	0.476
M0ZV36_SOLTU	M1BRQ6_SOLTU	M0ZV36	M1BRQ6	Uncharacterized protein.	Uncharacterized protein.	0.444
M0ZV36_SOLTU	M1BYW7_SOLTU	M0ZV36	M1BYW7	Uncharacterized protein.	Uncharacterized protein.	0.421
M1A1Z1_SOLTU	M0ZU81_SOLTU	M1A1Z1	M0ZU81	LRAT domain-containing protein.	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	0.441
M1A3F7_SOLTU	M0ZU81_SOLTU	M1A3F7	M0ZU81	Uncharacterized protein; Belongs to the sterol desaturase family.	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	0.441
M1BRQ6_SOLTU	M0ZU81_SOLTU	M1BRQ6	M0ZU81	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	0.451
M1BRQ6_SOLTU	M0ZV36_SOLTU	M1BRQ6	M0ZV36	Uncharacterized protein.	Uncharacterized protein.	0.444
M1BYW7_SOLTU	M0ZU81_SOLTU	M1BYW7	M0ZU81	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	0.444
M1BYW7_SOLTU	M0ZV36_SOLTU	M1BYW7	M0ZV36	Uncharacterized protein.	Uncharacterized protein.	0.421