STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0ZYW7_SOLTUUncharacterized protein. (150 aa)    
Predicted Functional Partners:
M0ZSJ5_SOLTU
Nop domain-containing protein.
   
 0.995
M1BWL8_SOLTU
WD_REPEATS_REGION domain-containing protein.
   
 0.991
M1AQD9_SOLTU
Uncharacterized protein.
   
 0.986
M1A4E9_SOLTU
WD_REPEATS_REGION domain-containing protein.
   
 0.980
M1C6M2_SOLTU
WD_REPEATS_REGION domain-containing protein.
   
 0.978
M1A8Z1_SOLTU
WD_REPEATS_REGION domain-containing protein.
   
 0.976
M1D063_SOLTU
WD_REPEATS_REGION domain-containing protein.
   
 0.976
M1C8X8_SOLTU
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.974
M1CI39_SOLTU
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.974
M1AGH1_SOLTU
Uncharacterized protein.
   
 0.972
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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