Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
M1A418_SOLTU | M1AJZ7_SOLTU | M1A418 | M1AJZ7 | UDENN domain-containing protein. | V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. | 0.475 |
M1A418_SOLTU | M1B2L7_SOLTU | M1A418 | M1B2L7 | UDENN domain-containing protein. | Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family. | 0.702 |
M1A418_SOLTU | M1BUX2_SOLTU | M1A418 | M1BUX2 | UDENN domain-containing protein. | RRM domain-containing protein. | 0.402 |
M1AJZ7_SOLTU | M1A418_SOLTU | M1AJZ7 | M1A418 | V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. | UDENN domain-containing protein. | 0.475 |
M1B2L7_SOLTU | M1A418_SOLTU | M1B2L7 | M1A418 | Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family. | UDENN domain-containing protein. | 0.702 |
M1BUX2_SOLTU | M1A418_SOLTU | M1BUX2 | M1A418 | RRM domain-containing protein. | UDENN domain-containing protein. | 0.402 |