STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1A533_SOLTUUncharacterized protein. (642 aa)    
Predicted Functional Partners:
M0ZWE6_SOLTU
Uncharacterized protein.
   
 0.998
M1CN79_SOLTU
Uncharacterized protein.
   
 0.998
M1AM61_SOLTU
Bms1-type G domain-containing protein.
   
 0.997
M1BX34_SOLTU
RIO domain-containing protein.
   
 0.995
M1CZU5_SOLTU
KH domain-containing protein.
   
 0.989
M1AX01_SOLTU
Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
   
 0.985
M1CKQ5_SOLTU
Uncharacterized protein.
   
 0.968
M1BPE5_SOLTU
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
  0.950
Q38HT5_SOLTU
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
    
  0.949
M0ZM85_SOLTU
S4 RNA-binding domain-containing protein.
   
 0.940
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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