STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1A547_SOLTUDDA1 domain-containing protein. (93 aa)    
Predicted Functional Partners:
M0ZWK6_SOLTU
CPSF_A domain-containing protein.
    
 0.989
M1CW71_SOLTU
Uncharacterized protein.
    
 
 0.882
M1BEW1_SOLTU
Uncharacterized protein.
    
 
 0.876
M1AVT8_SOLTU
WD_REPEATS_REGION domain-containing protein.
    
 0.868
M1BLQ4_SOLTU
Uncharacterized protein.
    
 0.868
M1CDP9_SOLTU
Uncharacterized protein.
    
 0.868
M1ATT5_SOLTU
WD_REPEATS_REGION domain-containing protein.
    
  0.861
M1BPI2_SOLTU
ZnF_CDGSH domain-containing protein.
    
 
 0.834
M1D267_SOLTU
ZnF_CDGSH domain-containing protein.
    
 
 0.834
M1BZV8_SOLTU
Uncharacterized protein.
    
 0.823
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.