M1AET7_SOLTU protein (Solanum tuberosum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M1AET7_SOLTU

HSF_DOMAIN domain-containing protein. (353 aa)

Predicted Functional Partners:

M1CWZ7_SOLTU

0.670

M1C3D5_SOLTU

0.603

M1BYS1_SOLTU

0.580

M0ZT86_SOLTU

0.562

M1CAJ2_SOLTU

0.555

M0ZUG1_SOLTU

0.545

M1AIV3_SOLTU

0.541

M1CYA5_SOLTU

0.522

M1AAQ8_SOLTU

0.493

M1APU7_SOLTU

0.493

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M0ZT86_SOLTU	M0ZUG1_SOLTU	M0ZT86	M0ZUG1	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.458
M0ZT86_SOLTU	M1AET7_SOLTU	M0ZT86	M1AET7	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	HSF_DOMAIN domain-containing protein.	0.562
M0ZT86_SOLTU	M1BYS1_SOLTU	M0ZT86	M1BYS1	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	Uncharacterized protein.	0.585
M0ZT86_SOLTU	M1CAJ2_SOLTU	M0ZT86	M1CAJ2	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	Uncharacterized protein; Belongs to the ClpA/ClpB family.	0.638
M0ZT86_SOLTU	M1CYA5_SOLTU	M0ZT86	M1CYA5	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.472
M0ZUG1_SOLTU	M0ZT86_SOLTU	M0ZUG1	M0ZT86	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.458
M0ZUG1_SOLTU	M1AET7_SOLTU	M0ZUG1	M1AET7	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	HSF_DOMAIN domain-containing protein.	0.545
M0ZUG1_SOLTU	M1BYS1_SOLTU	M0ZUG1	M1BYS1	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	Uncharacterized protein.	0.616
M0ZUG1_SOLTU	M1CAJ2_SOLTU	M0ZUG1	M1CAJ2	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	Uncharacterized protein; Belongs to the ClpA/ClpB family.	0.857
M0ZUG1_SOLTU	M1CYA5_SOLTU	M0ZUG1	M1CYA5	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.524
M1AAQ8_SOLTU	M1AET7_SOLTU	M1AAQ8	M1AET7	Peptidylprolyl isomerase.	HSF_DOMAIN domain-containing protein.	0.493
M1AET7_SOLTU	M0ZT86_SOLTU	M1AET7	M0ZT86	HSF_DOMAIN domain-containing protein.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.562
M1AET7_SOLTU	M0ZUG1_SOLTU	M1AET7	M0ZUG1	HSF_DOMAIN domain-containing protein.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.545
M1AET7_SOLTU	M1AAQ8_SOLTU	M1AET7	M1AAQ8	HSF_DOMAIN domain-containing protein.	Peptidylprolyl isomerase.	0.493
M1AET7_SOLTU	M1AIV3_SOLTU	M1AET7	M1AIV3	HSF_DOMAIN domain-containing protein.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.541
M1AET7_SOLTU	M1APU7_SOLTU	M1AET7	M1APU7	HSF_DOMAIN domain-containing protein.	Peptidylprolyl isomerase.	0.493
M1AET7_SOLTU	M1BYS1_SOLTU	M1AET7	M1BYS1	HSF_DOMAIN domain-containing protein.	Uncharacterized protein.	0.580
M1AET7_SOLTU	M1C3D5_SOLTU	M1AET7	M1C3D5	HSF_DOMAIN domain-containing protein.	Uncharacterized protein.	0.603
M1AET7_SOLTU	M1CAJ2_SOLTU	M1AET7	M1CAJ2	HSF_DOMAIN domain-containing protein.	Uncharacterized protein; Belongs to the ClpA/ClpB family.	0.555
M1AET7_SOLTU	M1CWZ7_SOLTU	M1AET7	M1CWZ7	HSF_DOMAIN domain-containing protein.	HTH cro/C1-type domain-containing protein.	0.670