STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1AFM8_SOLTUAMPKBI domain-containing protein. (279 aa)    
Predicted Functional Partners:
M1CRW4_SOLTU
Uncharacterized protein.
   
 0.644
M1APZ6_SOLTU
Uncharacterized protein.
  
0.590
M1B891_SOLTU
Uncharacterized protein.
   
 0.567
M1APZ7_SOLTU
Uncharacterized protein.
   
 0.522
M1CAZ6_SOLTU
Uncharacterized protein.
   
 0.522
PKIN1
Non-specific serine/threonine protein kinase.
    
 0.503
Atg6
Uncharacterized protein.
    
  0.485
M1D4M5_SOLTU
Uncharacterized protein.
   
 
 0.479
M0ZJU5_SOLTU
Uncharacterized protein.
   
 0.463
M0ZXU3_SOLTU
Uncharacterized protein.
   
 0.463
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.