STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1AGP3_SOLTUUncharacterized protein; Belongs to the FPP/GGPP synthase family. (342 aa)    
Predicted Functional Partners:
M1BB88_SOLTU
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family.
  
 0.955
M1C7S0_SOLTU
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family.
  
 0.955
M1AAA6_SOLTU
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
    
 0.943
M1CCW9_SOLTU
Uncharacterized protein.
    
 0.939
M1C547_SOLTU
Nudix hydrolase domain-containing protein.
  
 
 0.921
M0ZSX7_SOLTU
AA_kinase domain-containing protein.
     
 0.903
PVS1
Vetispiradiene synthase 1; Sesquiterpene synthase that catalyzes the formation of vetispiradiene from trans,trans-farnesyl diphosphate. The initial internal cyclization produces the monocyclic intermediate germacrene A.
   
 
 0.902
M0ZV25_SOLTU
Uncharacterized protein.
  
 0.901
M1AB35_SOLTU
Nudix hydrolase domain-containing protein.
  
 
 0.871
M1AEP1_SOLTU
Uncharacterized protein.
  
 0.859
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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