STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1AH18_SOLTURibosomal_L2 domain-containing protein. (229 aa)    
Predicted Functional Partners:
M0ZND0_SOLTU
Uncharacterized protein.
  
 0.983
M1CL91_SOLTU
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.978
rpl36
50S ribosomal protein L36, chloroplastic.
  
 
 0.977
M1C5C5_SOLTU
Uncharacterized protein.
   
 
 0.976
M1A989_SOLTU
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
  
 0.975
rpl20
50S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.975
M1D7T8_SOLTU
Uncharacterized protein.
  
 0.973
rpl22
50S ribosomal protein L22, chloroplastic; This protein binds specifically to 23S rRNA; Belongs to the universal ribosomal protein uL22 family.
  
 0.973
rps16
30S ribosomal protein S16, chloroplastic.
   
 
 0.971
M1BRG5_SOLTU
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.970
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.