STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1ALI0_SOLTUUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (138 aa)    
Predicted Functional Partners:
M0ZJ23_SOLTU
Small ubiquitin-related modifier.
   
 0.969
M1C0J7_SOLTU
Small ubiquitin-related modifier.
   
 0.969
M1C498_SOLTU
Small ubiquitin-related modifier.
   
 0.969
M1D1X2_SOLTU
SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family.
   
 0.938
M1CZM1_SOLTU
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.914
M1AXC6_SOLTU
SP-RING-type domain-containing protein.
   
 0.865
M1B8C9_SOLTU
ThiF domain-containing protein.
  
 0.864
M1CKB7_SOLTU
ThiF domain-containing protein.
  
 0.864
RANGAP2
WPP domain-containing protein.
   
 0.843
RANGAP1
WPP domain-containing protein.
   
 0.843
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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