STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1AM10_SOLTUHTH La-type RNA-binding domain-containing protein. (560 aa)    
Predicted Functional Partners:
M1AI36_SOLTU
Uncharacterized protein.
   
 
 0.643
M0ZN99_SOLTU
MI domain-containing protein.
   
 
 0.543
M0ZNS8_SOLTU
MI domain-containing protein.
   
 
 0.543
M1ADI9_SOLTU
MI domain-containing protein.
   
 
 0.543
M1AS85_SOLTU
MI domain-containing protein.
   
 
 0.543
M1CKQ5_SOLTU
Uncharacterized protein.
   
 
 0.478
M1BZU3_SOLTU
Uncharacterized protein.
   
    0.469
M1BWK9_SOLTU
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
   0.460
M1CNS6_SOLTU
Uncharacterized protein.
      
 0.408
M1C8D0_SOLTU
Uncharacterized protein.
      
 0.400
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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