STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1AMC9_SOLTUBUB1 N-terminal domain-containing protein. (387 aa)    
Predicted Functional Partners:
M1BGZ2_SOLTU
HORMA domain-containing protein.
  
 0.994
M1AMB7_SOLTU
Uncharacterized protein.
   
 0.973
M1B964_SOLTU
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.972
M1BK44_SOLTU
RING-type domain-containing protein.
    
 0.964
M1BKS6_SOLTU
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.963
M1CA81_SOLTU
TPR_REGION domain-containing protein.
    
 0.961
M1CIG1_SOLTU
GLTSCR1 domain-containing protein.
    
 0.961
M1C727_SOLTU
Uncharacterized protein.
   
 0.958
M1CWY5_SOLTU
Uncharacterized protein.
   
 0.958
M1CF39_SOLTU
WD_REPEATS_REGION domain-containing protein.
   
 0.948
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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