Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GATB | M1AMI4_SOLTU | M0ZMM1 | M1AMI4 | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. | Uncharacterized protein. | 0.451 |
GATB | M1BQ52_SOLTU | M0ZMM1 | M1BQ52 | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. | Uncharacterized protein. | 0.554 |
GATB | M1C6X4_SOLTU | M0ZMM1 | M1C6X4 | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.434 |
M1A4M8_SOLTU | M1AMI4_SOLTU | M1A4M8 | M1AMI4 | Anamorsin homolog; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis, facilitating the de novo assembly of a [4Fe-4S] cluster on the cytosolic Fe-S scaffold complex. Electrons are transferred from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Together with the diflavin oxidoreductase, also required for the assembly of the diferric tyrosyl radical cofactor of ribonucleotide reductase (RN [...] | Uncharacterized protein. | 0.493 |
M1AMI4_SOLTU | GATB | M1AMI4 | M0ZMM1 | Uncharacterized protein. | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. | 0.451 |
M1AMI4_SOLTU | M1A4M8_SOLTU | M1AMI4 | M1A4M8 | Uncharacterized protein. | Anamorsin homolog; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis, facilitating the de novo assembly of a [4Fe-4S] cluster on the cytosolic Fe-S scaffold complex. Electrons are transferred from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Together with the diflavin oxidoreductase, also required for the assembly of the diferric tyrosyl radical cofactor of ribonucleotide reductase (RN [...] | 0.493 |
M1AMI4_SOLTU | M1AY81_SOLTU | M1AMI4 | M1AY81 | Uncharacterized protein. | Uncharacterized protein. | 0.528 |
M1AMI4_SOLTU | M1B1K2_SOLTU | M1AMI4 | M1B1K2 | Uncharacterized protein. | Uncharacterized protein. | 0.528 |
M1AMI4_SOLTU | M1BQ52_SOLTU | M1AMI4 | M1BQ52 | Uncharacterized protein. | Uncharacterized protein. | 0.435 |
M1AMI4_SOLTU | M1C6B4_SOLTU | M1AMI4 | M1C6B4 | Uncharacterized protein. | PRP38_assoc domain-containing protein. | 0.489 |
M1AMI4_SOLTU | M1C6X4_SOLTU | M1AMI4 | M1C6X4 | Uncharacterized protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.526 |
M1AMI4_SOLTU | M1CL81_SOLTU | M1AMI4 | M1CL81 | Uncharacterized protein. | DNL-type domain-containing protein. | 0.443 |
M1AMI4_SOLTU | M1D1L5_SOLTU | M1AMI4 | M1D1L5 | Uncharacterized protein. | Anamorsin homolog; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis, facilitating the de novo assembly of a [4Fe-4S] cluster on the cytosolic Fe-S scaffold complex. Electrons are transferred from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Together with the diflavin oxidoreductase, also required for the assembly of the diferric tyrosyl radical cofactor of ribonucleotide reductase (RN [...] | 0.493 |
M1AY81_SOLTU | M1AMI4_SOLTU | M1AY81 | M1AMI4 | Uncharacterized protein. | Uncharacterized protein. | 0.528 |
M1B1K2_SOLTU | M1AMI4_SOLTU | M1B1K2 | M1AMI4 | Uncharacterized protein. | Uncharacterized protein. | 0.528 |
M1BQ52_SOLTU | GATB | M1BQ52 | M0ZMM1 | Uncharacterized protein. | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. | 0.554 |
M1BQ52_SOLTU | M1AMI4_SOLTU | M1BQ52 | M1AMI4 | Uncharacterized protein. | Uncharacterized protein. | 0.435 |
M1C6B4_SOLTU | M1AMI4_SOLTU | M1C6B4 | M1AMI4 | PRP38_assoc domain-containing protein. | Uncharacterized protein. | 0.489 |
M1C6X4_SOLTU | GATB | M1C6X4 | M0ZMM1 | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. | 0.434 |
M1C6X4_SOLTU | M1AMI4_SOLTU | M1C6X4 | M1AMI4 | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | Uncharacterized protein. | 0.526 |
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