STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1AMR1_SOLTUWD_REPEATS_REGION domain-containing protein. (460 aa)    
Predicted Functional Partners:
PHP
Uncharacterized protein.
    
 0.652
M1BQ52_SOLTU
Uncharacterized protein.
    
 0.595
GB2
WD_REPEATS_REGION domain-containing protein.
  
   
 0.573
GB1
Guanine nucleotide-binding protein subunit beta; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
  
   
 0.573
M1BAX3_SOLTU
WD_REPEATS_REGION domain-containing protein.
  
 
  0.557
M1B8I9_SOLTU
Uncharacterized protein.
  
 
  0.556
M1BS70_SOLTU
Uncharacterized protein.
  
 
  0.538
M1BHS2_SOLTU
Uncharacterized protein.
  
 
  0.537
M0ZHG7_SOLTU
WD_REPEATS_REGION domain-containing protein.
  
     0.509
M0ZX76_SOLTU
WD_REPEATS_REGION domain-containing protein.
  
     0.509
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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