STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1ANT0_SOLTUUncharacterized protein. (506 aa)    
Predicted Functional Partners:
M1BI66_SOLTU
Uncharacterized protein.
   
    0.721
M1C2I7_SOLTU
Uncharacterized protein.
   
    0.721
M1DFK4_SOLTU
GTP_EFTU_D3 domain-containing protein.
  
 
 
 0.699
M1BDH0_SOLTU
GTP_EFTU_D3 domain-containing protein.
  
 
 
 0.698
M1CQ87_SOLTU
Brix domain-containing protein.
   
    0.662
M1AED5_SOLTU
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 
 0.650
M1BQM9_SOLTU
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 
 0.650
Ef-p
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 
 0.650
M1CD37_SOLTU
Uncharacterized protein.
 
 
    0.581
M1A463_SOLTU
DRBM domain-containing protein.
    
 
 0.570
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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