STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1APT5_SOLTUGPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (308 aa)    
Predicted Functional Partners:
M1AEA3_SOLTU
RNA_pol_L_2 domain-containing protein.
    
 
 0.882
M0ZW95_SOLTU
Uncharacterized protein.
    
 
 0.871
M0ZZM0_SOLTU
Uncharacterized protein.
    
 
 0.871
M1A894_SOLTU
Uncharacterized protein.
    
 
 0.871
M1AWX4_SOLTU
Uncharacterized protein; Belongs to the GPN-loop GTPase family.
    
 
0.871
M1BSL7_SOLTU
Uncharacterized protein.
    
 
 0.871
M1A6Y3_SOLTU
Uncharacterized protein.
   
 0.856
M1BSI6_SOLTU
Uncharacterized protein.
    
 
 0.845
M1C0Y5_SOLTU
PALP domain-containing protein.
 
  
   0.665
M1BMH5_SOLTU
Uncharacterized protein.
    
 0.633
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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