STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1AQ63_SOLTU2Fe-2S ferredoxin-type domain-containing protein. (215 aa)    
Predicted Functional Partners:
M1BK29_SOLTU
NADPH:adrenodoxin oxidoreductase, mitochondrial.
    
 0.935
M1BJJ2_SOLTU
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
 
 0.765
M1D101_SOLTU
Uncharacterized protein.
 
 0.765
M1CGY9_SOLTU
Uncharacterized protein.
     
 0.750
Q43840_SOLTU
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
  
 
 0.734
M1B1N7_SOLTU
NifU_N domain-containing protein.
  
 0.717
M1A3V2_SOLTU
Uncharacterized protein; Belongs to the complex I LYR family.
   
   0.712
M1D0L7_SOLTU
Aminotran_5 domain-containing protein.
 
 0.703
M1BWE4_SOLTU
Uncharacterized protein.
   
 
 0.690
M0ZKU1_SOLTU
CCHC-type domain-containing protein.
  
 
 0.667
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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