STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1AU97_SOLTUzf-LSD1 domain-containing protein. (362 aa)    
Predicted Functional Partners:
M1ARN0_SOLTU
Aa_trans domain-containing protein.
      
 0.678
M1CXE0_SOLTU
Aa_trans domain-containing protein.
      
 0.678
M0ZV08_SOLTU
Aa_trans domain-containing protein.
      
 0.675
M1A2R3_SOLTU
Uncharacterized protein.
      
 0.675
M1B3F9_SOLTU
Aa_trans domain-containing protein.
      
 0.675
M1CXE4_SOLTU
Aa_trans domain-containing protein.
      
 0.675
CDPK7
Uncharacterized protein.
      
 0.671
M1A0T2_SOLTU
Uncharacterized protein.
      
 0.671
M1AYI8_SOLTU
Uncharacterized protein.
      
 0.671
M1BMF3_SOLTU
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
      
 0.671
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.