STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1AX52_SOLTUPHD-type domain-containing protein. (1837 aa)    
Predicted Functional Partners:
M1CR31_SOLTU
PCI domain-containing protein.
   
 0.857
M1AE64_SOLTU
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.829
M1C8P8_SOLTU
Uncharacterized protein.
   
 0.828
M1C8Q0_SOLTU
PCI domain-containing protein.
   
 0.828
M0ZVS7_SOLTU
VWFA domain-containing protein.
   
 0.813
M1AWK7_SOLTU
PCI domain-containing protein.
   
 0.813
M1C253_SOLTU
VWFA domain-containing protein.
   
 0.813
M1BQR5_SOLTU
PCI domain-containing protein.
   
 0.797
M1C6F6_SOLTU
PCI domain-containing protein.
   
 0.797
M1A6K1_SOLTU
PCI domain-containing protein.
   
 0.793
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.