STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1AYL7_SOLTUNuclear pore protein. (850 aa)    
Predicted Functional Partners:
GATC
Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family.
   
 0.977
M0ZRG2_SOLTU
Nuclear pore complex protein NUP35.
  
 0.975
M1BZT5_SOLTU
Uncharacterized protein.
   
 0.973
M1AWQ8_SOLTU
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
   
 0.972
M0ZZ47_SOLTU
Uncharacterized protein.
   
 0.960
M0ZZ48_SOLTU
Uncharacterized protein.
   
 0.960
M1A4Y3_SOLTU
Uncharacterized protein.
   
 0.948
M1BNU5_SOLTU
C2H2-type domain-containing protein.
    
 0.944
M1BYS0_SOLTU
C2H2-type domain-containing protein.
    
 0.944
M1BIM3_SOLTU
WD_REPEATS_REGION domain-containing protein.
   
 0.943
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.