STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1AYP5_SOLTUUncharacterized protein. (310 aa)    
Predicted Functional Partners:
M1CKG0_SOLTU
PWWP domain-containing protein.
   
 0.918
M1BI55_SOLTU
FHA domain-containing protein.
    
 0.906
M1AI15_SOLTU
Uncharacterized protein.
   
 
 0.872
M1CXY2_SOLTU
B30.2/SPRY domain-containing protein.
    
 0.820
M1CMP6_SOLTU
WD_REPEATS_REGION domain-containing protein.
   
 0.796
M1AYP6_SOLTU
Uncharacterized protein.
 
      0.725
M1AYS8_SOLTU
ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase.
    
 0.711
M1BX71_SOLTU
Uncharacterized protein.
   
 
 0.697
M1B3S3_SOLTU
SAP domain-containing protein.
    
 0.666
M0ZS34_SOLTU
Metallophos domain-containing protein.
    
 0.658
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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