STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1B001_SOLTUUncharacterized protein. (185 aa)    
Predicted Functional Partners:
M1C5C5_SOLTU
Uncharacterized protein.
   
 0.973
M0ZND0_SOLTU
Uncharacterized protein.
  
 0.966
M1A989_SOLTU
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
  
 0.961
M1D7T8_SOLTU
Uncharacterized protein.
  
 0.961
M1CWR8_SOLTU
Uncharacterized protein.
   
 
 0.959
M1BE47_SOLTU
Ribosomal_L18e/L15P domain-containing protein.
  
 0.956
M1BWL5_SOLTU
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.955
M1BCQ5_SOLTU
Uncharacterized protein.
  
 
 0.954
M1B312_SOLTU
Uncharacterized protein.
  
 
 0.953
M1CL91_SOLTU
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.952
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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