STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1B526_SOLTUPeptidylprolyl isomerase. (228 aa)    
Predicted Functional Partners:
M0ZZ00_SOLTU
Peptidylprolyl isomerase.
   
 0.564
M1CHK3_SOLTU
Peptidylprolyl isomerase.
   
  
 0.561
M1BZS1_SOLTU
Peptidylprolyl isomerase.
   
 0.540
M1A2T5_SOLTU
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 0.516
M1B7H0_SOLTU
Peptidylprolyl isomerase.
   
  
 0.494
M0ZIF8_SOLTU
PPIase cyclophilin-type domain-containing protein.
   
  
 0.479
M1CQ87_SOLTU
Brix domain-containing protein.
   
 
 0.463
M1A0W9_SOLTU
Uncharacterized protein.
   
  
 0.446
M1CN98_SOLTU
PsaL domain-containing protein.
      
 0.442
M1CN99_SOLTU
PsaL domain-containing protein.
      
 0.442
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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