STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1B7M1_SOLTUUncharacterized protein. (84 aa)    
Predicted Functional Partners:
M1E0L8_SOLTU
Uncharacterized protein.
    
 0.706
M1AW23_SOLTU
AB hydrolase-1 domain-containing protein.
    
 0.627
M1CJR0_SOLTU
Uncharacterized protein.
    
 0.627
M1B5X7_SOLTU
Uncharacterized protein.
    
 0.462
M1AHR2_SOLTU
TPR_REGION domain-containing protein.
   
 0.434
M1BAC1_SOLTU
TPR_REGION domain-containing protein.
   
 0.434
M1CMP6_SOLTU
WD_REPEATS_REGION domain-containing protein.
    
 0.408
ycf3
Photosystem I assembly protein Ycf3; Essential for the assembly of the photosystem I (PSI) complex. May act as a chaperone-like factor to guide the assembly of the PSI subunits; Belongs to the Ycf3 family.
   
 
 0.401
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.