STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1BE22_SOLTUFe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (320 aa)    
Predicted Functional Partners:
M1A3K6_SOLTU
Aminotran_1_2 domain-containing protein.
     
 0.834
M1A1X2_SOLTU
Aminotran_1_2 domain-containing protein.
     
 0.827
M0ZHA2_SOLTU
Aminotran_1_2 domain-containing protein.
     
 0.817
M0ZUT0_SOLTU
Aminotran_1_2 domain-containing protein.
     
 0.759
M1AW72_SOLTU
Aminotran_1_2 domain-containing protein.
     
 0.759
M1BXJ3_SOLTU
Aminotran_1_2 domain-containing protein.
     
 0.759
M0ZGX5_SOLTU
Aminotran_1_2 domain-containing protein.
     
 0.758
M1D7L9_SOLTU
Aminotran_1_2 domain-containing protein.
     
 0.758
STACS5
Aminotran_1_2 domain-containing protein.
     
 0.714
M1A1I1_SOLTU
Aminotran_1_2 domain-containing protein.
     
 0.713
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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