STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1BFN1_SOLTUUncharacterized protein; Belongs to the cyclin family. (424 aa)    
Predicted Functional Partners:
M1CDD7_SOLTU
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
    
 0.927
M1AWX7_SOLTU
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
     
 0.926
M1AK84_SOLTU
CYCLIN domain-containing protein; Belongs to the cyclin family.
     
 0.898
M1CAQ9_SOLTU
CYCLIN domain-containing protein; Belongs to the cyclin family.
     
 0.898
M1ASA8_SOLTU
Uncharacterized protein.
     
 0.868
M1C8B3_SOLTU
MAT1 domain-containing protein.
     
 0.868
M1CKG2_SOLTU
Uncharacterized protein.
   
 
 0.862
M1D0G2_SOLTU
EAF domain-containing protein.
     
 0.859
GTF2H2
VWFA domain-containing protein.
   
 
 0.857
M1C1Q1_SOLTU
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
     
 0.851
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.