STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1BLX9_SOLTURuvB-like helicase; Belongs to the RuvB family. (471 aa)    
Predicted Functional Partners:
M1AEB0_SOLTU
RuvB-like helicase; Belongs to the RuvB family.
  
0.997
M1BEA0_SOLTU
RuvB-like helicase; Belongs to the RuvB family.
  
0.997
M1BYV2_SOLTU
Uncharacterized protein; Belongs to the actin family.
   
 0.997
M1AI92_SOLTU
SANT domain-containing protein.
   
 0.988
M1CDY3_SOLTU
YL1_C domain-containing protein.
    
 0.983
M1C212_SOLTU
HIT-type domain-containing protein.
    
 0.982
M0ZVR6_SOLTU
FATC domain-containing protein.
   
 0.976
M1BU68_SOLTU
YL1_C domain-containing protein.
    
 0.974
M1BG86_SOLTU
Uncharacterized protein.
   
 0.973
M1AYM3_SOLTU
Helicase C-terminal domain-containing protein.
   
 0.958
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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